Course Identification

Chemical biology
20222071

Lecturers and Teaching Assistants

Prof. David Margulies
N/A

Course Schedule and Location

2022
First Semester
Thursday, 09:15 - 11:00, WSoS, Rm C
28/10/2021
18/03/2022

Field of Study, Course Type and Credit Points

Chemical Sciences: Lecture; Elective; Regular; 2.00 points
Life Sciences: Lecture; Elective; Regular; 2.00 points
Life Sciences (Molecular and Cellular Neuroscience Track): Lecture; Elective; Regular; 2.00 points

Comments

N/A

Prerequisites

No

Restrictions

20

Language of Instruction

English

Attendance and participation

Obligatory

Grade Type

Numerical (out of 100)

Grade Breakdown (in %)

5%
20%
75%

Evaluation Type

Examination

Scheduled date 1

14/02/2022
WSoS, Rm A
1000-1300
N/A

Scheduled date 2

14/03/2022
WSoS, Rm C
1000-1300
The exam will take place as scheduled.

Estimated Weekly Independent Workload (in hours)

N/A

Syllabus

In the field of chemical biology, synthetic molecules are applied to elucidate and regulate the function of biological systems. This course will outline important developments in this field and will provide specific examples of how Chemical Biology tools can contribute to and advance our understanding of different biological processes and improve our ability to treat diseases.

This course complements the course “Bioorganic Chemistry”. However, in this course a larger emphasis will be placed on understanding the current challenges in investigating and regulating a wide range of biological systems. Little emphasis will be placed on chemical synthesis and characterization techniques. The course does not require prior knowledge.

The Chemical Biology tools that will be covered include the following:

 

1) Unnatural amino acids, expanding the genetic code

2) Immune system modulators

3) Chemical inducers of dimerization (CIDs) – artificial signal transduction

4) Small-molecule-based proteolysis-targeting chimeras (PROTACs)

5) Chemical genetics

6) Covalent inhibitors – chemical biology-based drugs

7) High-throughput screening (HTS) of inhibitors

8) Activity-based protein profiling (ABPP) - identifying new therapeutic targets

9) Bacteria targeting and engineering

10) Chemical glycobiology

11) Enzymatic labeling of proteins

 

These chemical biology tools will be taught in the context of understanding various biological systems and processes, and in treating diseases.

The topics that will be covered include the following:

 

1) The immune system

2) Immune diseases and immunotherapy

3) The ubiquitin system

4) The neural system

5) Neurodegenerative diseases (e.g., Alzheimer’s)

6) Cancer detection and treatment

7) Signal transduction therapy of cancer

8) Pathogenic bacteria and quorum sensing

9) Viral infection and treatment

10) Protein imaging

11) Modifying biological drugs

 

Additional research areas may also be included

Learning Outcomes

Upon successful completion of this course students should be able to:

Gain a deeper understanding in how to use Chemical Biology tools to investigate biological processes, to identify therapeutic targets, and to develop new drugs.

 

Reading List

References will be given in class

Website

N/A