Course Identification

Expansion microscopy- a laboratory course
20253521

Lecturers and Teaching Assistants

Dr. Alina Kolpakov, Dr. Keren Yacobi-Sharon
N/A

Course Schedule and Location

2025
First Semester
10:00 - 16:00, WSoS, Lab
24/11/2024
08/12/2024

Field of Study, Course Type and Credit Points

Life Sciences: Laboratory; 1.00 points

Comments

The lectures details appear in the syllabus.
Students are required to submit a short abstract to the lecturer in advance.

Prerequisites

  • Students that have been successfully using immunohistochemistry staining and are familiar with light microscopy imaging.
  • The technique that will be taught on the course is not suitable for every sample. Since each student will be working on their own sample, there are specific requirements for samples that can be used:
  1. Animal cell culture
  2. Organoids and small soft tissues/embryos (up to 2mm in length and 300mm in width)
  • Only one student per scientific group will be accepted.
  • Each participant should submit a short description of their project and sample of interest to alina.kolpakova@weizmann.ac.il , to ensure compatibility with the course. 
  • The participants should be ready to prepare their samples by the beginning of the practical part of the course.

Restrictions

10

Language of Instruction

English

Attendance and participation

Obligatory

Grade Type

Numerical (out of 100)

Grade Breakdown (in %)

20%
80%

Evaluation Type

Laboratory

Scheduled date 1

N/A
N/A
-
N/A

Estimated Weekly Independent Workload (in hours)

4

Syllabus

Expansion microscopy is a technique in which fluorophores on fixed specimens are linked to a swellable polymer that is physically expanded to enable super-resolution microscopy, finer than the diffraction limit, with ordinary light microscopes. This practical course aims at hands-on learning of the technique and is intended for students who already have been successfully using immunohistochemistry staining and imaging of their samples, ranging from cells to small tissues. 

During the course each student will work on their own sample, and will present their project and results, achieved during the course.

 

Lectures  
 
Sunday 24-נוב Expansion Microscopy Overview 10:00-12:00 Alina FGS Lab Classroom
Experimental Overview Keren
Practical work  
 
Sunday 01-דצמ Practical work (anchoring and gelation) 10:00-15:00 Alina&Keren FGS Laboratory
Monday 02-דצמ Pre-expansion imaging 10:00-16:00 Alina&Keren Microscopy
Tuesday 03-דצמ Practical work (Digestion and Expansion) 10:00-16:00 Alina&Keren FGS Laboratory
Wedneday 04-דצמ Post-Expansion Imaging 10:00-15:00 Alina&Keren Microscopy
Thursday 05-דצמ Post-Expansion Imaging 10:00-15:00 Alina&Keren Microscopy
Final Presentations  
 
Sunday 08-דצמ Personal Project presentation 10:00-16:00 Alina&Keren FGS Lab Classroom

 

Learning Outcomes

After this course you should be able to:

  • Appreciate the theory of expansion microscopy
  • Appreciate the resolution of expansion microscopy given the specific probes and specimens
  • Apply expansion microscopy on your own samples once back in your laboratory (sample preparation and imaging)
  • Spread the technique to your colleagues in their respective laboratories

Reading List

N/A

Website

N/A